Supplementary Figure S3: Gene expression dominance with respect to a sample’s social chromosome genotype. (A) Explanation of the conversion of log-fold change values for SB/SBvs. SB/Sb and SB/SB vs. Sb/Sb comparisons into a single angle value representing the dominance pattern of a given gene. For space, in this figure SB/SB is abbreviated BB ,SB/Sb is abbreviated Bb , and Sb/Sb is abbreviatedbb . (B) Polar plot of the dominance patterns of genes differentially expressed in response to changes in supergene genotype within the supergene itself. The angle represents the expression pattern while the radial distance is the negative log-transformed FDR-corrected p-value (further out implying more significant). (C) Polar plot of the dominance patterns of genes outside of the supergene and differentially expressed in response to changes in supergene genotype.