Features SEGUL AMAS goalign
Alignment compression yes
Alignment concatenation yes yes limited
Alignment consensus yes
Alignment conversion multiple files multiple files single file
Alignment drawing yes
Alignment filtering yes
Alignment masking yes
Alignment shuffling yes
Alignment splitting yes yes yes
Alignment summary statistics rich moderate limited
Alignment to unaligned sequence conversion yes
Alignment transposal yes
Contiguous sequence summary statistics yes
Duplicate sequence removal yes
Multi-sequence alignment yes
Open reading frame finder yes
Partition format conversion yes
Raw read summary statistics limited
Sample distribution mapping yes
Sample mapping yes
Sequence comparison yes
Sequence extraction multiple files single file
Sequence ID renaming multiple files single file
Sequence removal multiple files multiple files single file
Sequence replication multiple files single file
Sequence translation multiple files multiple files single file
Sequence trimming yes
Sequence unique ID parsing yes
API support yes yes yes
GUI version availability yes
Mobile support yes